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Link to this search: https://omia.org/results/?gb_species_id=9627&result_type=variant&search_type=advanced

4 variant records found

[show instead phene records]

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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.

Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.

OMIA Variant ID OMIA Phene-Species ID(s) Species Name Breed(s) Variant Phenotype Gene Allele Type of Variant Source of Genetic Variant Deleterious? Reference Sequence Chr. g. or m. c. or n. p. Verbal Description EVA ID Inferred EVA rsID Year Published PubMed ID(s) Acknowledgements
667 OMIA:000201-9627 red fox Dark Standard Silver ASIP deletion, gross (>20) Naturally occurring variant no VulVul2.2 NW_020356514.1 A 16.5-kb deletion resulting in "a 166-nt deletion in the Standard Silver fox cDNA, spanning the second exon ... .This deletion removes the start codon and entire signal peptide" 1997 9054949
1525 OMIA:001652-9627 red fox Platinum coat colour KIT splicing Naturally occurring variant yes G>A variant in the first nucleotide of KIT intron 17 causes skipping of exon 17 2015 25662789
115 OMIA:001199-9627 red fox Coat colour, extension MC1R E^A missense Naturally occurring variant no VulVul2.2 NW_020356486.1 g.6101019T>C c.373T>C p.(C125R) XM_026005028.1; XP_025860813.1 1997 9054949
1118 OMIA:000202-9627 red fox Albinism TYR insertion, small (<=20) Naturally occurring variant yes VulVul2.2 NW_020356544.1 g.7130732dup c.365dup p.(N122Kfs4*) XM_026015193.1; XP_025870978.1; published as c.365dupA 2019 31246286
Overall Statistics
Total number of variants 4
Variants with genomic location 3 (75.0% )
Variants in a variant database, i.e. with rs ID 0 (0.0%)
Variant Type Count Percent
deletion, gross (>20) 1 25.0%
insertion, small (<=20) 1 25.0%
missense 1 25.0%
splicing 1 25.0%
Year First Reported Count Percent
1997 2 50.0%
1998 0 0.0%
1999 0 0.0%
2000 0 0.0%
2001 0 0.0%
2002 0 0.0%
2003 0 0.0%
2004 0 0.0%
2005 0 0.0%
2006 0 0.0%
2007 0 0.0%
2008 0 0.0%
2009 0 0.0%
2010 0 0.0%
2011 0 0.0%
2012 0 0.0%
2013 0 0.0%
2014 0 0.0%
2015 1 25.0%
2016 0 0.0%
2017 0 0.0%
2018 0 0.0%
2019 1 25.0%