OMIA:000326-8839 : Eggshell colour in Anas platyrhynchos (Mallard)

In other species: elegant crested-tinamou , chicken , Australian magpie , eastern bluebird , spotted nothura

Categories: Pigmentation phene

Mendelian trait/disorder: unknown

Disease-related: no

Species-specific description: see also OMIA:002589-8839 : Eggshell colour, ABCG2-related in Anas platyrhynchos

Mapping: Liu et al. (2021) used genome-wide association analysis and identity by descent to finely map green egg colour to a 179-kb region of Chr4 based on the resequencing of 352 ducks (Anas platyrhynchos) from a segregating population resulting from the mating of Pekin ducks (white-shelled eggs) and mallards (green-shelled eggs). We further narrowed the candidate region to a 30-kb interval ... . Among the genes located in the finely mapped region, only one transcript of the ABCG2 gene (XM_013093252.2) exhibited higher uterine expression in green-shelled individuals than in white-shelled individuals, as supported by transcriptome data from four populations. ABCG2 has been reported to encode a protein that functions as a membrane transporter for biliverdin. Sanger sequencing of the whole 30-kb candidate region (Chr4: 47.41-47.44 Mb) and a plasmid reporter assay helped to identify a single nucleotide polymorphism (Chr4: 47,418,074 G>A) located in a conserved predicted promoter region whose variation may alter ABCG2 transcription activity."

Cite this entry

Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2024). OMIA:000326-8839: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70

Reference

2024 Zhang, M., Lu, L., Li, Y., Wu, Q., Liu, Y., Liu, H., Tang, H., Lin, R., Chen, H., Zeng, T., Tian, Y., Yan, Y., Wei, Y., Ren, C., Li, W., Liu, M., Yu, J., Liu, J., Lin, X., Zeng, G., Cheng, C., Jiang, X., Sun, Y. :
Identification of SNPs and INDELS associated with duck egg quality traits through a genome-wide association analysis. Poult Sci 103:S0032-5791(24)01037-X:104459, 2024. Pubmed reference: 39504828. DOI: 10.1016/j.psj.2024.104459.

Edit History


  • Created by Imke Tammen2 on 17 Aug 2021
  • Changed by Imke Tammen2 on 17 Aug 2021
  • Changed by Imke Tammen2 on 25 Aug 2021
  • Changed by Imke Tammen2 on 10 Nov 2022
  • Changed by Imke Tammen2 on 08 Feb 2024