OMIA:000326-8839 : Eggshell colour in Anas platyrhynchos (Mallard) |
In other species: elegant crested-tinamou , chicken , Australian magpie , eastern bluebird , spotted nothura
Categories: Pigmentation phene
Mendelian trait/disorder: unknown
Disease-related: no
Species-specific description: see also OMIA:002589-8839 : Eggshell colour, ABCG2-related in Anas platyrhynchos
Mapping: Liu et al. (2021) used genome-wide association analysis and identity by descent to finely map green egg colour to a 179-kb region of Chr4 based on the resequencing of 352 ducks (Anas platyrhynchos) from a segregating population resulting from the mating of Pekin ducks (white-shelled eggs) and mallards (green-shelled eggs). We further narrowed the candidate region to a 30-kb interval ... . Among the genes located in the finely mapped region, only one transcript of the ABCG2 gene (XM_013093252.2) exhibited higher uterine expression in green-shelled individuals than in white-shelled individuals, as supported by transcriptome data from four populations. ABCG2 has been reported to encode a protein that functions as a membrane transporter for biliverdin. Sanger sequencing of the whole 30-kb candidate region (Chr4: 47.41-47.44 Mb) and a plasmid reporter assay helped to identify a single nucleotide polymorphism (Chr4: 47,418,074 G>A) located in a conserved predicted promoter region whose variation may alter ABCG2 transcription activity."
Cite this entry
Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2024). OMIA:000326-8839: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70
Reference
2024 | Zhang, M., Lu, L., Li, Y., Wu, Q., Liu, Y., Liu, H., Tang, H., Lin, R., Chen, H., Zeng, T., Tian, Y., Yan, Y., Wei, Y., Ren, C., Li, W., Liu, M., Yu, J., Liu, J., Lin, X., Zeng, G., Cheng, C., Jiang, X., Sun, Y. : |
Identification of SNPs and INDELS associated with duck egg quality traits through a genome-wide association analysis. Poult Sci 103:S0032-5791(24)01037-X:104459, 2024. Pubmed reference: 39504828. DOI: 10.1016/j.psj.2024.104459. |
Edit History
- Created by Imke Tammen2 on 17 Aug 2021
- Changed by Imke Tammen2 on 17 Aug 2021
- Changed by Imke Tammen2 on 25 Aug 2021
- Changed by Imke Tammen2 on 10 Nov 2022
- Changed by Imke Tammen2 on 08 Feb 2024