OMIA:001565-9913 : Abortion and stillbirth, MIMT1-related in Bos taurus (taurine cattle) |
Categories: Mortality / aging (incl. embryonic lethal)
Links to MONDO diseases: No links.
Mendelian trait/disorder: yes
Considered a defect: yes
Key variant known: yes
Year key variant first reported: 2010
Molecular basis: Flisikowski et al. (2010) described a Finnish Ayrshire bull with an incidence of almost 50% of late abortion/stillbirth in his progeny. A half-sib linkage analysis with the BovineSNP50 BeadChip implicated the maternally imprinted PEG3 domain on chromosome BTA18. Genes in this region are not expressed when inherited from the female parent. Close examination of this region disclosed that this bull was heterozygous for a 110 kb deletion in the MIMT1 gene. All of his offspring will have received a non-functional (maternally imprinted) version of this gene from their dam. The 50% of his offspring that receive the deletion from the bull will therefore have no functional MIMT1 gene. The vast majority of these offspring die in late pregnancy, resulting in late abortion/stillbirth. From a gene-expression study in affected and normal foetuses, Flisikowski et al. (2012) implicated a number of genes, especially NRSP1, which encodes neuropeptide S receptor 1.
Genetic engineering:
Unknown
Have human generated variants been created, e.g. through genetic engineering and gene editing
Breed:
Ayrshire (Cattle) (VBO_0000120).
Breeds in which the phene has been documented. For breeds in which a likely causal variant has been documented, see the variant table below
Associated gene:
| Symbol | Description | Species | Chr | Location | OMIA gene details page | Other Links |
|---|---|---|---|---|---|---|
| MIMT1 | MER1 repeat containing imprinted transcript 1 (non-protein coding) | Bos taurus | - | no genomic information (-..-) | MIMT1 | Homologene, Ensembl , NCBI gene |
Variants
By default, variants are sorted chronologically by year of publication, to provide a historical perspective.
Readers can re-sort on any column by clicking on the column header. Click it again to sort in a descending
order. To create a multiple-field sort, hold down Shift while clicking on the second, third etc relevant column
headers.
WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
| OMIA Variant ID | Breed(s) | Variant Phenotype | Gene | Allele | Type of Variant | Source of Genetic Variant | Reference Sequence | Chr. | g. or m. | c. or n. | p. | Verbal Description | EVA ID | Inferred EVA rsID | Year Published | PubMed ID(s) | Acknowledgements |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 644 | Ayrshire (Cattle) | Abortion and stillbirth due to mutation in MIMT1 | MIMT1 | deletion, gross (>20) | Naturally occurring variant | 18 | a 110 kb deletion in the MIMT1 gene | 2010 | 21152099 |
Cite this entry
Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2023). OMIA:001565-9913: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70
References
Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.
| 2013 | Venhoranta, H., Bauersachs, S., Taponen, J., Lohi, H., Taira, T., Andersson, M., Kind, A., Schnieke, A., Flisikowski, K. : |
| Fetal growth restriction caused by MIMT1 deletion alters brain transcriptome in cattle. Int J Dev Neurosci 31:463-7, 2013. Pubmed reference: 23726833. DOI: 10.1016/j.ijdevneu.2013.05.003. | |
| 2012 | Flisikowski, K., Venhoranta, H., Bauersachs, S., Hänninen, R., Fürst, R.W., Saalfrank, A., Ulbrich, S.E., Taponen, J., Lohi, H., Wolf, E., Kind, A., Andersson, M., Schnieke, A. : |
| Truncation of MIMT1 gene in the PEG3 domain leads to major changes in placental gene expression and stillbirth in cattle. Biol Reprod 87:140, 2012. Pubmed reference: 23100617. DOI: 10.1095/biolreprod.112.104240. | |
| 2010 | Flisikowski, K., Venhoranta, H., Nowacka-Woszuk, J., McKay, SD., Flyckt, A., Taponen, J., Schnabel, R., Schwarzenbacher, H., Szczerbal, I., Lohi, H., Fries, R., Taylor, JF., Switonski, M., Andersson, M. : |
| A novel mutation in the maternally imprinted PEG3 domain results in a loss of MIMT1 expression and causes abortions and stillbirths in cattle (Bos taurus). PLoS One 5:e15116, 2010. Pubmed reference: 21152099. DOI: 10.1371/journal.pone.0015116. |
Edit History
- Created by Frank Nicholas on 17 May 2011
- Changed by Frank Nicholas on 05 Sep 2011
- Changed by Frank Nicholas on 09 Dec 2011
- Changed by Frank Nicholas on 17 May 2013
- Changed by Imke Tammen2 on 08 Oct 2023