OMIA:001680-9913 : Coat colour, dominant white with bilateral deafness in Bos taurus (taurine cattle) |
In other species: American mink
Categories: Pigmentation phene
Links to possible relevant human trait(s) and/or gene(s) in OMIM: 103500 (trait) , 156845 (gene)
Single-gene trait/disorder: yes
Mode of inheritance: Autosomal dominant
Disease-related: yes
Key variant known: yes
Year key variant first reported: 2011
Species-specific name: Glass-eyed albino; German White Fleckvieh syndrome
Species-specific description: Philipp et al. (2011) reported a "dominantly inherited syndrome associated with hypopigmentation, heterochromia irides, colobomatous eyes and bilateral hearing loss . . . in Fleckvieh cattle"
Mapping: Using a genome-wide scan with the bovine Illumina SNP chip, Philipp et al. (2011) mapped this disorder to a region of chromosome BTA22 identified by three SNPs located "at 33.422, 36.052 and 36.060 Mb". This regions contains 13 genes, including the gene encoding microphthalmia-associated transcription factor (MITF), a strong candidate. Using "8 cases and 4 control maternal cousins", each genotyped with the Illumina BovineSNP50 chip, Capitan et al. (2014)/Bourneuf et al. (2017) narrowed the location of this trait to a 1.6Mb region on chromosome BTA22: 31,446,714-33,076,318 that contains MITF.
Molecular basis: Philipp et al. (2011) reported the cause of this disorder in German Fleckvieh cattle as being a "missense mutation (c.629G>T, p.210R>I) was identified within exon 7 of the bovine MITF" gene. Bourneuf et al. (2017) discovered a de novo likely causal variant in the same gene in the Holstein breed, namely BTA22: g.31746506_31746508del; p.R211del (UMD3.1).
Clinical features: As described by Philipp et al. (2011): "The German White Fleckvieh cattle family exhibited pure white coat color, pink skin without any darker spots or ghost patterns, yellow-white hooves, white horns, pigmentless muzzle, anus, eyelids, eye lashes, cilia, nictitating membranes and conjunctivae . . . . The irides were pale blue in the central part and white towards the periphery . . . . Pupils exhibited typical albinotic light reflection and the ocular fundus was completely or nearly completely albinotic using direct ophthalmoscopy . . . . Optic disks were enlarged and irregular. The white animals were bilaterally deaf. We could not observe behavioural reactions or Preyer's reflex on different sounds. Sensorineural hearing loss could be confirmed using brainstem auditory evoked response (BAER) tests in two young bulls."
Breed:
Fleckvieh-Simmental, Germany (Cattle) (VBO_0002354).
Breeds in which the phene has been documented. (If a likely causal variant has been documented for the phene, see the variant table breeds in which the variant has been reported).
Associated gene:
Symbol | Description | Species | Chr | Location | OMIA gene details page | Other Links |
---|---|---|---|---|---|---|
MITF | microphthalmia-associated transcription factor | Bos taurus | 22 | NC_037349.1 (31843489..31614654) | MITF | Homologene, Ensembl , NCBI gene |
Variants
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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
OMIA Variant ID | Breed(s) | Variant Phenotype | Gene | Allele | Type of Variant | Source of Genetic Variant | Reference Sequence | Chr. | g. or m. | c. or n. | p. | Verbal Description | EVA ID | Year Published | PubMed ID(s) | Acknowledgements |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
837 | Holstein (black and white) (Cattle) | Glass-eyed albino | MITF | deletion, small (<=20) | Naturally occurring variant | ARS-UCD1.2 | 22 | g.31628127_31628129del | p.(R211del) | UMD3.1 position g.31746506_31746508del | rs5334474965 | 2017 | 28904385 | The genomic location on ARS-UCD1.2 was determined by Katie Eager and Shernae Woolley, EMAI, NSW. Department of Primary Industries. | ||
189 | Fleckvieh-Simmental, Germany (Cattle) | Dominant white with bilateral deafness | MITF | missense | Naturally occurring variant | ARS-UCD1.3 | 22 | NC_037349.1:g.31628131C>A | NM_001001150.2:c.629G>T | NP_001001150.1:p.(R210I) | UMD3.1 position is g.31746502 | rs5334474903 | 2011 | 22174915 | Variant coordinates obtained from or confirmed by EBI's Some Effect Predictor (VEP) tool. The genomic location on ARS-UCD1.2 was determined by Katie Eager and Shernae Woolley, EMAI, NSW. Department of Primary Industries. |
Cite this entry
Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2017). OMIA:001680-9913: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70
References
Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.
2017 | Bourneuf, E., Otz, P., Pausch, H., Jagannathan, V., Michot, P., Grohs, C., Piton, G., Ammermüller, S., Deloche, M.C., Fritz, S., Leclerc, H., Péchoux, C., Boukadiri, A., Hozé, C., Saintilan, R., Créchet, F., Mosca, M., Segelke, D., Guillaume, F., Bouet, S., Baur, A., Vasilescu, A., Genestout, L., Thomas, A., Allais-Bonnet, A., Rocha, D., Colle, M.A., Klopp, C., Esquerré, D., Wurmser, C., Flisikowski, K., Schwarzenbacher, H., Burgstaller, J., Brügmann, M., Dietschi, E., Rudolph, N., Freick, M., Barbey, S., Fayolle, G., Danchin-Burge, C., Schibler, L., Bed'Hom, B., Hayes, B.J., Daetwyler, H.D., Fries, R., Boichard, D., Pin, D., Drögemüller, C., Capitan, A. : |
Rapid discovery of de novo deleterious mutations in cattle enhances the value of livestock as model species. Sci Rep 7:11466, 2017. Pubmed reference: 28904385. DOI: 10.1038/s41598-017-11523-3. | |
2015 | Strain, G.M. : |
The genetics of deafness in domestic animals. Front Vet Sci 2:29, 2015. Pubmed reference: 26664958. DOI: 10.3389/fvets.2015.00029. | |
2011 | Philipp, U., Lupp, B., Mömke, S., Stein, V., Tipold, A., Eule, J.C., Rehage, J., Distl, O. : |
A MITF mutation associated with a dominant white phenotype and bilateral deafness in German Fleckvieh cattle. PLoS One 6:e28857, 2011. Pubmed reference: 22174915. DOI: 10.1371/journal.pone.0028857. | |
1966 | Leipold, H.W., Huston, K. : |
A herd of glass eyed albino Hereford cattle J Hered 57:179-82, 1966. Pubmed reference: 4961565. DOI: 10.1093/oxfordjournals.jhered.a107500. |
Edit History
- Created by Frank Nicholas on 18 Dec 2011
- Changed by Frank Nicholas on 18 Dec 2011
- Changed by Frank Nicholas on 19 Sep 2017