OMIA:002116-9796 : Coat colour, albinism, oculocutaneous, HPS5-related in Equus caballus (domestic horse) |
In other species: domestic cat , three-spined stickleback
Categories: Pigmentation phene
Links to possible relevant human trait(s) and/or gene(s) in OMIM: 614074 (trait) , 607521 (gene)
Single-gene trait/disorder: yes
Disease-related: no
Key variant known: yes
Year key variant first reported: 2024
Species-specific name: Eden White
Species-specific symbol:
EDXW1, EDXW2, EDXW3
Markers: McFadden et al. (2024) report 3 HPS5 variants that are associated with white spotting: "The first mutation, S1013C termed Eden White 1 (EDXW1), is a missense mutation found to increase average depigmentation by 5.56 points ... . Eden White 2 (EDXW2), a missense mutation L560F, increased depigmentation by 9.5 points for individuals with one copy of the variant, but we were unable to phenotype homozygotes ... . Eden White 3 (EDXW3), a putative donor splice site mutation at exon 4 + 4, increased white by 5.59 points on average ... . EDXW1 and EDXW3 are epistatically influenced by MC1R ... . We tested for epistatic interactions between EDXW1 and Dominant White 20 and found that horses with one copy of each allele had increased average white spotting by 8 points with respect to EDXW1/n or W20/n horses. Compound heterozygotes were significantly more white than horses with one copy of either mutation ... .
Associated gene:
| Symbol | Description | Species | Chr | Location | OMIA gene details page | Other Links |
|---|---|---|---|---|---|---|
| HPS5 | HPS5 biogenesis of lysosomal organelles complex 2 subunit 2 | Equus caballus | 7 | NC_091690.1 (88994784..88958322) | HPS5 | Ensembl, NCBI gene |
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Cite this entry
Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2026). OMIA:002116-9796: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70
References
Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.
| 2026 | Rocha, I.A.B., Araujo, F., Patterson Rosa, L. : |
| Pedigree-based assessment of genetic structure and disease-associated variants in Friesian horses in Brazil. J Equine Vet Sci 160:S0737-0806(26)00096-1:105860, 2026. Pubmed reference: 41865906. DOI: 10.1016/j.jevs.2026.105860. | |
| 2024 | McFadden, A., Vierra, M., Martin, K., Brooks, S.A., Everts, R.E., Lafayette, C. : |
| Spotting the pattern: A review on white coat color in the domestic horse. Animals (Basel) 14:451, 2024. Pubmed reference: 38338094. DOI: 10.3390/ani14030451. | |
| McFadden, A., Martin, K., Vierra, M., Robilliard, H., Lundquist, E.W., Everts, R.E., Brooks, S.A., Lafayette, C. : | |
| Three HPS5 mutations associated with depigmentation in diverse horse breeds. Livestock Science 282:105454, 2024. DOI: 10.1016/j.livsci.2024.105454. |
Edit History
- Created by Imke Tammen2 on 04 Jun 2024
- Changed by Imke Tammen2 on 04 Jun 2024
- Changed by Imke Tammen2 on 31 Mar 2026