OMIA:002116-9796 : Coat colour, albinism, oculocutaneous, HPS5-related in Equus caballus (domestic horse)

In other species: domestic cat , three-spined stickleback

Categories: Pigmentation phene

Links to possible relevant human trait(s) and/or gene(s) in OMIM: 614074 (trait) , 607521 (gene)

Single-gene trait/disorder: yes

Disease-related: no

Key variant known: yes

Year key variant first reported: 2024

Species-specific name: Eden White

Species-specific symbol: EDXW1, EDXW2, EDXW3

Markers: McFadden et al. (2024) report 3 HPS5 variants that are associated with white spotting: "The first mutation, S1013C termed Eden White 1 (EDXW1), is a missense mutation found to increase average depigmentation by 5.56 points  ... . Eden White 2 (EDXW2), a missense mutation L560F, increased depigmentation by 9.5 points for individuals with one copy of the variant, but we were unable to phenotype homozygotes ... . Eden White 3 (EDXW3), a putative donor splice site mutation at exon 4 + 4, increased white by 5.59 points on average ... . EDXW1 and EDXW3 are epistatically influenced by MC1R ... . We tested for epistatic interactions between EDXW1 and Dominant White 20 and found that horses with one copy of each allele had increased average white spotting by 8 points with respect to EDXW1/n or W20/n horses. Compound heterozygotes were significantly more white than horses with one copy of either mutation ... . 

Associated gene:

Symbol Description Species Chr Location OMIA gene details page Other Links
HPS5 HPS5 biogenesis of lysosomal organelles complex 2 subunit 2 Equus caballus 7 NC_091690.1 (88994784..88958322) HPS5 Ensembl, NCBI gene

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Cite this entry

Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2026). OMIA:002116-9796: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70

References

Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.

2026 Rocha, I.A.B., Araujo, F., Patterson Rosa, L. :
Pedigree-based assessment of genetic structure and disease-associated variants in Friesian horses in Brazil. J Equine Vet Sci 160:S0737-0806(26)00096-1:105860, 2026. Pubmed reference: 41865906. DOI: 10.1016/j.jevs.2026.105860.
2024 McFadden, A., Vierra, M., Martin, K., Brooks, S.A., Everts, R.E., Lafayette, C. :
Spotting the pattern: A review on white coat color in the domestic horse. Animals (Basel) 14:451, 2024. Pubmed reference: 38338094. DOI: 10.3390/ani14030451.
McFadden, A., Martin, K., Vierra, M., Robilliard, H., Lundquist, E.W., Everts, R.E., Brooks, S.A., Lafayette, C. :
Three HPS5 mutations associated with depigmentation in diverse horse breeds. Livestock Science 282:105454, 2024. DOI: 10.1016/j.livsci.2024.105454.

Edit History


  • Created by Imke Tammen2 on 04 Jun 2024
  • Changed by Imke Tammen2 on 04 Jun 2024
  • Changed by Imke Tammen2 on 31 Mar 2026