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OMIA:002668-9031 : Feather colour, sub-Columbian in Gallus gallus (chicken)

Categories: Pigmentation phene

Links to possible relevant human trait(s) and/or gene(s) in OMIM: 606202 (gene) , 600160 (gene)

Mendelian trait/disorder: no

Mode of inheritance: Z-linked

Disease-related: no

Key variant known: yes

Year key variant first reported: 2023

Species-specific description: Li et al. (2023): "The Chinese commercial “Yufen I” laying hen hybrid lines are cultivated by Henan Agricultural University and include 3 lines. H line chicken plumage is almost white with black barring on the hackles, primaries, secondaries, and tail, and is sex-linked inheritance ... . This coloration is very similar to the Columbian plumage pattern, but with the barring substituting for the black vertical striping. ... The results show that the sub-Columbian plumage pattern is formed by the SLC45A2 that controls sliver feathers [see OMIA:000915-9031] and CDKN2A that controls barred spots [see OMIA:000102-9031]. "

Associated genes:

Symbol Description Species Chr Location OMIA gene details page Other Links
SLC45A2 solute carrier family 45, member 2 Gallus gallus Z NC_052572.1 (10901748..10882873) SLC45A2 Homologene, Ensembl , NCBI gene
CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) Gallus gallus Z NC_052572.1 (83339835..83329906) CDKN2A Homologene, Ensembl , NCBI gene

Cite this entry

Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2023). OMIA:002668-9031: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70

Reference

2023 Li, R., Wang, X., Wang, Y., Liu, D., Zhang, Y., Liu, Y., Niu, X., Han, R., Li, H., Jiang, R., Sun, G., Li, G., Tian, Y., Liu, X., Kang, X., Li, Z. :
Research Note: Combined analysis of BSA-seq based mapping and RNA-seq reveals candidate genes associated with sub-Columbian plumage in H line chickens. Poult Sci 102:102665, 2023. Pubmed reference: 37068355. DOI: 10.1016/j.psj.2023.102665.

Edit History


  • Created by Imke Tammen2 on 21 Apr 2023
  • Changed by Imke Tammen2 on 21 Apr 2023