OMIA:002916-9615 : Charcot-Marie-Tooth disease, ITPR3-related in Canis lupus familiaris (dog) |
Categories: Skeleton phene (incl. short stature & teeth) , Nervous system phene
Links to possible relevant human trait(s) and/or gene(s) in OMIM: 147267 (gene) , 620111 (trait)
Links to relevant human diseases in MONDO:
Single-gene trait/disorder: yes
Mode of inheritance: Autosomal recessive
Disease-related: yes
Key variant known: yes
Year key variant first reported: 2025
Species-specific name: Charcot-Marie-Tooth disease 1J with amelogenesis imperfecta
Species-specific description: Hytönen et al. (2025) "report the identification of a homozygous nonsense variant in the ITPR3 gene in Lancashire Heeler dogs, presenting with a severe developmental enamel defect and reduced nerve conduction velocity."
Mapping: Hytönen et al. (2025): Genome-wide genotyping with a canine high density SNP array followed by "homozygosity mapping revealed only one case-specific region of allelic homozygosity (ROH) on chromosome 12 (g.156,577–5,127,877).
Molecular basis: Hytönen et al. (2025) "performed whole-exome sequencing (WES) on two affected dogs ... and whole-genome sequencing (WGS) on one affected dog" and idendified a likely causal variant: g.12:3214076C>T; XM_038553756.1:5002C>T; XP_038409684:p.Q1668X.
Clinical features: Hytönen et al. (2025): "affected Lancashire Heeler dogs ... were originally identified by abnormal enamel in the permanent teeth, including severe yellow to brown discoloration, enamel hypoplasia and abrasion leading to exposure of dentin ... . The enamel defects were already apparent upon tooth eruption. ... Two out of three dogs had deformity detected in their front limbs, i.e. outward rotation of front limbs from the elbow joint. ... Abnormal electromyographic findings consistent with demyelinating neuropathy were detected in all three examined dogs and consisted of fibrillation potentials and positive sharp waves occurring predominantly in distal appendicular limb muscles ... . Fibrillation potentials were also detected in paraspinal musculature." Reduced motor nerve conduction velocities and decreased compound muscle action potential (CMAP) amplitudes and increased CMAP duration were observed in two out of three affected dogs."
Breed:
Lancashire Heeler (Dog) (VBO_0200808).
Breeds in which the phene has been documented. (If a likely causal variant has been documented for the phene, see the variant table breeds in which the variant has been reported).
Associated gene:
Symbol | Description | Species | Chr | Location | OMIA gene details page | Other Links |
---|---|---|---|---|---|---|
ITPR3 | inositol 1,4,5-trisphosphate receptor type 3 | Canis lupus familiaris | 12 | NC_051816.1 (3313122..3382514) | ITPR3 | Homologene, Ensembl , NCBI gene |
Variants
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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
OMIA Variant ID | Breed(s) | Variant Phenotype | Gene | Allele | Type of Variant | Source of Genetic Variant | Reference Sequence | Chr. | g. or m. | c. or n. | p. | Verbal Description | EVA ID | Year Published | PubMed ID(s) | Acknowledgements |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1769 | Lancashire Heeler (Dog) | Charcot-Marie-Tooth disease 1J with amelogenesis imperfecta | ITPR3 | nonsense (stop-gain) | Naturally occurring variant | UU_Cfam_GSD_1.0 | 12 | NC_049233.1:g.12:3214076C>T | XM_038553756.1:c.5002C>T | XP_038409684:p.Q1668X | 2025 | 39804930 |
Clinical synopsis/links to phenotypes
Cite this entry
Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2025). OMIA:002916-9615: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70
Reference
2025 | Hytönen, M.K., Rönkkö, J., Hundi, S., Jokinen, T.S., Suonto, E., Teräväinen, E., Donner, J., La Rovere, R., Bultynck, G., Ylikallio, E., Tyynismaa, H., Lohi, H. : |
IP3 receptor depletion in a spontaneous canine model of Charcot-Marie-Tooth disease 1J with amelogenesis imperfecta. PLoS Genet 21:e1011328, 2025. Pubmed reference: 39804930. DOI: 10.1371/journal.pgen.1011328. |
Edit History
- Created by Imke Tammen2 on 22 Jan 2025
- Changed by Imke Tammen2 on 22 Jan 2025