OMIA:002916-9615 : Charcot-Marie-Tooth disease, ITPR3-related in Canis lupus familiaris (dog)

Categories: Skeleton phene (incl. short stature & teeth) , Nervous system phene

Links to possible relevant human trait(s) and/or gene(s) in OMIM: 147267 (gene) , 620111 (trait)

Links to relevant human diseases in MONDO:

Single-gene trait/disorder: yes

Mode of inheritance: Autosomal recessive

Disease-related: yes

Key variant known: yes

Year key variant first reported: 2025

Species-specific name: Charcot-Marie-Tooth disease 1J with amelogenesis imperfecta

Species-specific description: Hytönen et al. (2025) "report the identification of a homozygous nonsense variant in the ITPR3 gene in Lancashire Heeler dogs, presenting with a severe developmental enamel defect and reduced nerve conduction velocity." 

Mapping: Hytönen et al. (2025): Genome-wide genotyping with a canine high density SNP array followed by "homozygosity mapping revealed only one case-specific region of allelic homozygosity (ROH) on chromosome 12 (g.156,577–5,127,877). 

Molecular basis: Hytönen et al. (2025) "performed whole-exome sequencing (WES) on two affected dogs ...  and whole-genome sequencing (WGS) on one affected dog" and idendified a likely causal variant: g.12:3214076C>T; XM_038553756.1:5002C>T; XP_038409684:p.Q1668X.

Clinical features: Hytönen et al. (2025): "affected Lancashire Heeler dogs ... were originally identified by abnormal enamel in the permanent teeth, including severe yellow to brown discoloration, enamel hypoplasia and abrasion leading to exposure of dentin ... . The enamel defects were already apparent upon tooth eruption. ... Two out of three dogs had deformity detected in their front limbs, i.e. outward rotation of front limbs from the elbow joint. ... Abnormal electromyographic findings consistent with demyelinating neuropathy were detected in all three examined dogs and consisted of fibrillation potentials and positive sharp waves occurring predominantly in distal appendicular limb muscles ... . Fibrillation potentials were also detected in paraspinal musculature." Reduced motor nerve conduction velocities and decreased compound muscle action potential (CMAP) amplitudes and increased CMAP duration were observed in two out of three affected dogs."

Breed: Lancashire Heeler (Dog) (VBO_0200808).
Breeds in which the phene has been documented. (If a likely causal variant has been documented for the phene, see the variant table breeds in which the variant has been reported).

Associated gene:

Symbol Description Species Chr Location OMIA gene details page Other Links
ITPR3 inositol 1,4,5-trisphosphate receptor type 3 Canis lupus familiaris 12 NC_051816.1 (3313122..3382514) ITPR3 Homologene, Ensembl , NCBI gene

Variants

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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.

Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.

OMIA Variant ID Breed(s) Variant Phenotype Gene Allele Type of Variant Source of Genetic Variant Reference Sequence Chr. g. or m. c. or n. p. Verbal Description EVA ID Year Published PubMed ID(s) Acknowledgements
1769 Lancashire Heeler (Dog) Charcot-Marie-Tooth disease 1J with amelogenesis imperfecta ITPR3 nonsense (stop-gain) Naturally occurring variant UU_Cfam_GSD_1.0 12 NC_049233.1:g.12:3214076C>T XM_038553756.1:c.5002C>T XP_038409684:p.Q1668X 2025 39804930

Clinical synopsis/links to phenotypes

Variant Phenotype(s) References (Pubmed ID)
1769 MP:0030544: abnormal enamel development
MP:0000550: abnormal forelimb morphology
MP:0013129: abnormal tooth color
HP:0033383: Decreased compound muscle action potential amplitude
HP:0003431: Decreased motor nerve conduction velocity
HP:0003457: EMG abnormality
UPHENO:0081269: enamel hypoplasia
HP:0009830: Peripheral neuropathy
39804930

Cite this entry

Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2025). OMIA:002916-9615: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70

Reference

2025 Hytönen, M.K., Rönkkö, J., Hundi, S., Jokinen, T.S., Suonto, E., Teräväinen, E., Donner, J., La Rovere, R., Bultynck, G., Ylikallio, E., Tyynismaa, H., Lohi, H. :
IP3 receptor depletion in a spontaneous canine model of Charcot-Marie-Tooth disease 1J with amelogenesis imperfecta. PLoS Genet 21:e1011328, 2025. Pubmed reference: 39804930. DOI: 10.1371/journal.pgen.1011328.

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  • Created by Imke Tammen2 on 22 Jan 2025
  • Changed by Imke Tammen2 on 22 Jan 2025