OMIA:003011-9615 : Ichthyosis, ALOXE3-related in Canis lupus familiaris (dog)

Links to possible relevant human trait(s) and/or gene(s) in OMIM: 607206 (gene) , 606545 (trait)

Links to relevant human diseases in MONDO:

Single-gene trait/disorder: yes

Mode of inheritance: Probably autosomal recessive

Disease-related: yes

Key variant known: yes

Year key variant first reported: 2025

Molecular basis: Vinberg et al. (2025) "sequenced the genome of the affected [Chihuahua] dog and compared the data to 1567 control genomes. Filtering for private variants identified a homozygous missense variant in ALOXE3, XP_038392720.1:p.(Gly460Asp). ALOXE3 is a known candidate gene for ichthyosis in humans and encodes arachidonate epidermal lipoxygenase 3."

Clinical features: Vinberg et al. (2025) "investigated a Chihuahua with severe scaling since age 12 weeks. The scaling was generalized and involved the entire body and legs. The paw pads were mildly hyperkeratotic."

Pathology: Vinberg et al. (2025) reported histopathological findings in skin biopsies of an affected Chihuahua which showed "markedly increased amounts of keratin in the stratum corneum (marked lamellar orthokeratotic hyperkeratosis), with keratin lifting and flaking, explaining the clinical scaling ... . Mildly increased amounts of keratin in the infundibular hair follicle lumen were also observed (infundibular hyperkeratosis)."

Breed: Chihuahua (Dog) (VBO_0200338).
Breeds in which the phene or likely causal variants have been documented. If a likely causal variant has been documented, see variant-specific breed information in the variant table. (Breed information may be incomplete).

Associated gene:

Symbol Description Species Chr Location OMIA gene details page Other Links
ALOXE3 arachidonate lipoxygenase 3 Canis lupus familiaris 5 NC_051809.1 (33044337..33020545) ALOXE3 Ensembl, NCBI gene

Variants

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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.

Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.

OMIA Variant ID Breed(s) Variant Phenotype Gene Allele Variant Type Variant Effect Source of Genetic Variant Pathogenicity Classification* Reference Sequence Chr. g. or m. c. or n. p. Verbal Description EVA ID Year Published PubMed ID(s) Acknowledgements
1834 Chihuahua (Dog) ichthyosis, ALOXE3-related ALOXE3 substitution missense Naturally occurring variant Not currently evaluated UU_Cfam_GSD_1.0 5 NC_049226.1:g.33136922C>T XM_038536792.1:c.1379G>A XP_038392720.1:p.(G460D) 2025 41057024

* Variant pathogenicity for single gene diseases as evaluated by an expert panel of the International Society of Animal Genetics (ISAG) Animal Genetic Testing Standardization Standing Committee

Clinical synopsis/links to phenotypes

Variant Phenotype(s) References (Pubmed ID)
1834 MP:0001240: abnormal epidermis stratum corneum morphology
MP:0001242: hyperkeratosis
HP:0008064: Ichthyosis
MP:0001192: scaly skin
41057024

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Cite this entry

Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2025). OMIA:003011-9615: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70

Reference

2025 Vinberg, C., Rietmann, S.J., Soto, S., Jagannathan, V., Åhman, S., Leeb, T. :
ALOXE3 missense variant in a Chihuahua with autosomal recessive ichthyosis. Anim Genet 56:e70055, 2025. Pubmed reference: 41057024. DOI: 10.1111/age.70055.

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  • Created by Imke Tammen2 on 09 Oct 2025
  • Changed by Imke Tammen2 on 09 Oct 2025