OMIA 000668-9031 : Muffs and beard in Gallus gallus
|Symbol||Description||Species||Chr||Location||OMIA gene details page||Other Links|
|HOXB8||homeobox B8||Gallus gallus||27||NC_052558.1 (3402859..3404508)||HOXB8||Homologene, Ensembl, NCBI gene|
By default, variants are sorted chronologically by year of publication, to provide a historical perspective. Readers can re-sort on any column by clicking on the column header. Click it again to sort in a descending order. To create a multiple-field sort, hold down Shift while clicking on the second, third etc relevant column headers.
WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
|OMIA Variant ID||Breed(s)||Variant Phenotype||Gene||Allele||Type of Variant||Source of Genetic Variant||Reference Sequence||Chr.||g. or m.||c. or n.||p.||Verbal Description||EVA ID||Inferred EVA rsID||Year Published||PubMed ID(s)||Acknowledgements|
|751||Huiyang Bearded||Muffs and beard||HOXB8||complex rearrangement||Naturally occurring variant||27||"The Mb allele differs from the wild-type mb allele by three duplications, one in tandem and two that are translocated to that of the tandem repeat around 1.70 Mb on GGA27||2016||27253709|
Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.
|2020||Yang, K.X., Zhou, H., Ding, J.M., He, C., Niu, Q., Gu, C.J., Zhou, Z.X., Meng, H., Huang, Q.Z. :|
|Copy number variation in HOXB7 and HOXB8 involves in the formation of beard trait in chickens. Anim Genet 51:958-963, 2020. Pubmed reference: 33058257. DOI: 10.1111/age.13011.|
|2016||Guo, Y., Gu, X., Sheng, Z., Wang, Y., Luo, C., Liu, R., Qu, H., Shu, D., Wen, J., Crooijmans, R.P., Carlborg, Ö., Zhao, Y., Hu, X., Li, N. :|
|A Complex Structural Variation on Chromosome 27 Leads to the Ectopic Expression of HOXB8 and the Muffs and Beard Phenotype in Chickens. PLoS Genet 12:e1006071, 2016. Pubmed reference: 27253709. DOI: 10.1371/journal.pgen.1006071.|
|2015||Sun, Y., Liu, R., Zhao, G., Zheng, M., Sun, Y., Yu, X., Li, P., Wen, J. :|
|Genome-Wide Linkage Analysis Identifies Loci for Physical Appearance Traits in Chickens. G3 (Bethesda) 5:2037-41, 2015. Pubmed reference: 26248982. DOI: 10.1534/g3.115.020883.|
|1993||Shoffner, R.N., Otis, J.S., Garwood, V.A. :|
|Association of dominant marker traits and metric traits in chickens. Poultry Science 72:1405-1410, 1993. Pubmed reference: 8378215.|
|1990||Somes, R.G. Jr :|
|Mutations and major variants of plumage and skin in chickens. In "Poultry Breeding and Genetics" (ed. R.D. Crawford), Elsevier, Amsterdam; Chapter 6 :169-208, 1990.|
|1949||Hutt, F.B. :|
|Genetics of the fowl. McGraw-Hill, New York. :, 1949.|
|Warren, DC. :|
|Linkage relations of autosomal factors in the fowl. Genetics 34:333-50, 1949. Pubmed reference: 17247319.|
|1933||Hertwig, P. :|
|Geschlechtsgebundene und autosomale Koppelungen bei Hühnern Verh. Deutsch. Zool. Ges . :112-118, 1933.|
|1930||Serebrovsky, A.S., Petrov, S.G. :|
|[On the composition of the plan of the chromosomes of the domestic fowl] translated by B.F. Glessing. U.S. Dept. Agric. Journal of Experimental Biology (Russian) 6:157-179, 1930.|
|1906||Davenport, C.B. :|
|"Inheritance in poultry". Washington, D.C.: Carnegie Institution of Washington. Publication 52. :1-136, 1906. DOI: 10.5962/bhl.title.29926.|
- Created by Frank Nicholas on 06 Sep 2005
- Changed by Frank Nicholas on 26 Nov 2012
- Changed by Frank Nicholas on 03 Jun 2016
- Changed by Imke Tammen2 on 27 Oct 2021