OMIA 001506-9615 : Neuronal ceroid lipofuscinosis, 8 in Canis lupus familiaris

Possibly relevant human trait(s) and/or gene(s) (MIM number): 600143

Mendelian trait/disorder: yes

Mode of inheritance: Autosomal Recessive

Considered a defect: yes

Key variant known: yes

Year key variant first reported: 2005

History: This disorder was first reported by Koppang (1970), who established a colony of English Setters in which the disorder segregated.

Mapping: Lingaas et al. (1998) conducted a genome scan with a panel of 103 microsatellites in a pedigree of "133 animals in three families with a total of 117 offspring". Subsequent genotyping of additional animals with a targetted set of markers from the genome scan enabled Lingaas et al. (1998) to report that "Linkage analysis showed three genetic markers to be linked to the disease locus with the closest marker at a distance of about 3 CM. Two other loci were linked with these markers making a linkage group of five genetic markers. The linkage group spanned a distance of 54 CM." At this time, this linkage group had not been allocated to a particular canine chromosome. By 2005, it was known that this linkage group corresponds to a region of chromosome CFA37 (Katz et al., 2005).

Molecular basis: In one of the early uses of the initial canine genome assembly, Katz et al. (2005) conducted megablast searches of the canine genome with all eight then-known human genes for ceroid lipofuscinosos. One of these (CLN8) was shown to be located on CFA37, near to the mapped location of this disorder (see Mapping section above). Sequencing of the canine CLN8 gene in affected English Setters revealed the causative mutation to be "a T-to-C transition in the CLN8 gene that predicts a p.L164P missense mutation".

Whole-genome sequencing of an affected "mixed breed dog with Australian Shepherd and Blue Heeler ancestry" enabled Guo et al. (2014) to identify a nonsense mutation in the CLN8 gene of this dog, namely c.585G>A; p.Trp195*. Genotyping of archival samples enabled these authors to confirm the causality of this mutation.

Hirz et al. (2017) reported "a homozygous deletion encompassing the entire CLN8 gene as the most likely causative mutation for the NCL form observed in both cases" "of NCL in Alpenländische Dachsbracke dogs from different litters of the same sire with a different dam".

Lingaas et al. (2018) reported a likely causal variant in the Saluki breed, namely a "single bp insertion (c.349dupT) in exon 2, introducing an immediate stop codon (p.Glu117*)"

Breeds: Alpenländische Dachsbracke, English Setter.

Associated gene:

Symbol Description Species Chr Location OMIA gene details page Other Links
CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) Canis lupus familiaris 37 NC_006619.3 (30863098..30885831) CLN8 Homologene, Ensembl, NCBI gene

Variants

By default, variants are sorted chronologically by year of publication, to provide a historical perspective.

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Breed(s) Variant Phenotype Gene Allele Type of Variant Reference Sequence Chr. g. or m. c. or n. p. Verbal Description EVA ID Year Published PubMed ID(s) Acknowledgements
Alpenländische Dachsbracke Neuronal ceroid lipofuscinosis, 8 CLN8 deletion, gross (>20) CanFam3.1 37 g.30852988_30902901del a homozygous deletion encompassing the entire CLN8 gene 2017 28024876 g. information obtained from Katz et al. (2017) Neurobiol Dis. doi: 10.1016/j.nbd.2017.08.017
Saluki Neuronal ceroid lipofuscinosis, 8 CLN8 insertion, small (<=20) CanFam3.1 37 g.30874636dupT c.349dupT p.Glu117* "an insertion of 1 bp (T) in the CLN8 gene (Fig. S2) in a short T repeat, thereby changing the stretch of 9 T's to a stretch consisting of 10 T's. The exact position of the inserted base could obviously not be verified, given that this was an insertion of a single base in a stretch of nine repeats of the same base (CFA37:g.30874628–30874636). According to the recommended nomenclature, the T insertion was noted as a T duplication in the T farthest in the 3′ direction (g.30874636dupT; c.349dupT)" 2018 29446145
English Setter Neuronal ceroid lipofuscinosis, 8 CLN8 missense CanFam3.1 37 g.30874779T>C c.491T>C p.L164P 2005 15629147 Variant coordinates obtained from or confirmed by EBI's Some Effect Predictor (VEP) tool
Australian Shepherd Neuronal ceroid lipofuscinosis, 8 CLN8 nonsense (stop-gain) CanFam3.1 37 g.30883950G>A c.585G>A p.W195* 2014 24953404 Variant coordinates obtained from or confirmed by EBI's Some Effect Predictor (VEP) tool

References


Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.
2018 Lingaas, F., Guttersrud, O.A., Arnet, E., Espenes, A. :
Neuronal ceroid lipofuscinosis in Salukis is caused by a single base pair insertion in CLN8. Anim Genet 49:52-58, 2018. Pubmed reference: 29446145. DOI: 10.1111/age.12629.
2017 Hirz, M., Drögemüller, M., Schänzer, A., Jagannathan, V., Dietschi, E., Goebel, H.H., Hecht, W., Laubner, S., Schmidt, M.J., Steffen, F., Hilbe, M., Köhler, K., Drögemüller, C., Herden, C. :
Neuronal ceroid lipofuscinosis (NCL) is caused by the entire deletion of CLN8 in the Alpenländische Dachsbracke dog. Mol Genet Metab 120:269-277, 2017. Pubmed reference: 28024876. DOI: 10.1016/j.ymgme.2016.12.007.
Katz, M.L., Rustad, E., Robinson, G.O., Whiting, R.E.H., Student, J.T., Coates, J.R., Narfstrom, K. :
Canine neuronal ceroid lipofuscinoses: Promising models for preclinical testing of therapeutic interventions. Neurobiol Dis :, 2017. Pubmed reference: 28860089. DOI: 10.1016/j.nbd.2017.08.017.
2014 Guo, J., Johnson, G.S., Brown, H.A., Provencher, M.L., da Costa, R.C., Mhlanga-Mutangadura, T., Taylor, J.F., Schnabel, R.D., O'Brien, D.P., Katz, M.L. :
A CLN8 nonsense mutation in the whole genome sequence of a mixed breed dog with neuronal ceroid lipofuscinosis and Australian Shepherd ancestry. Mol Genet Metab 112:302-9, 2014. Pubmed reference: 24953404. DOI: 10.1016/j.ymgme.2014.05.014.
2013 Bond, M., Holthaus, S.M., Tammen, I., Tear, G., Russell, C. :
Use of model organisms for the study of neuronal ceroid lipofuscinosis. Biochim Biophys Acta 1832:1842-65, 2013. Pubmed reference: 23338040. DOI: 10.1016/j.bbadis.2013.01.009.
2005 Katz, ML., Khan, S., Awano, T., Shahid, SA., Siakotos, AN., Johnson, GS. :
A mutation in the CLN8 gene in English Setter dogs with neuronal ceroid-lipofuscinosis. Biochem Biophys Res Commun 327:541-7, 2005. Pubmed reference: 15629147. DOI: 10.1016/j.bbrc.2004.12.038.
2002 Jolly, R.D., Brown, S., Das, A.M., Walkley, S.U. :
Mitochondrial dysfunction in the neuronal ceroid-lipofuscinoses (Batten disease). Neurochem Int 40:565-71, 2002. Pubmed reference: 11850114.
2001 Katz, M.L., Shibuya, H., Johnson, G.S. :
Animal models for the ceroid lipofuscinoses. Adv Genet 45:183-203, 2001. Pubmed reference: 11332773.
Siakotos, A.N., Hutchins, G.D., Farlow, M.R., Katz, M.L. :
Assessment of dietary therapies in a canine model of Batten disease. Eur J Paediatr Neurol :151-6, 2001. Pubmed reference: 11588988.
1998 Lingaas, F., Aarskaug, T., Sletten, M., Bjerkas, I., Grimholt, U., Moe, L., Juneja, R.K., Wilton, A.N., Galibert, F., Holmes, N.G., Dolf, G. :
Genetic markers linked to neuronal ceroid lipofuscinosis in English Setter dogs Animal Genetics 29:371-376, 1998. Pubmed reference: 9800325.
Shibuya, H., Liu, P.C., Katz, M.L., Siakotos, A.N., Nonneman, D.J., Johnson, G.S. :
Coding sequence and exon/intron organization of the canine CLN3 (Batten-disease) gene and its exclusion as the locus for ceroid-lipofuscinosis in English Setter dogs Journal of Neuroscience Research 52:268-275, 1998. Pubmed reference: 9590435.
Siakotos, A.N., Blair, P.S., Savill, J.D., Katz, M.L. :
Altered mitochondrial function in canine ceroid-lipofuscinosis Neurochemical Research 23:983-989, 1998. Pubmed reference: 9690741.
1997 Nilsson, S.E., Wrigstad, A. :
Electrophysiology in some animal and human hereditary diseases involving the retinal pigment epithelium. Eye (Lond) 11 ( Pt 5):698-706, 1997. Pubmed reference: 9474321. DOI: 10.1038/eye.1997.180.
1995 Katz, M.L., Siakotos, A.N. :
Canine hereditary ceroid-lipofuscinosis: Evidence for a defect in the carnitine biosynthetic pathway American Journal of Medical Genetics 57:266-271, 1995. Pubmed reference: 7668343. DOI: 10.1002/ajmg.1320570231.
Kitani, K., Senda, M., Toyama, H., Miyasaka, K., Kanai, S., Ohta, M., Ivy, G.O., Koppang, N. :
Decline in glucose metabolism in the brain in neuronal ceroid lipofuscinosis (NCL) in English setter--evidence by positron emission tomography (PET). Gerontology 41 Suppl 2:249-57, 1995. Pubmed reference: 8821336.
Savill, J., Azzarelli, B., Siakotos, A.N. :
Early detection of canine ceroid-lipofuscinosis (CCL): An ultrastructural study American Journal of Medical Genetics 57:250-253, 1995. Pubmed reference: 7668340. DOI: 10.1002/ajmg.1320570228.
Siakotos, A.N., Schnippel, K., Lin, R.C., Vankuijk, F.J.G.M. :
Biosynthesis and metabolism of 4-hydroxynonenal in canine ceroid-lipofuscinosis American Journal of Medical Genetics 57:290-293, 1995. Pubmed reference: 7668347. DOI: 10.1002/ajmg.1320570235.
1994 Dunn, W.A., Raizada, M.K., Vogt, E.S., Brown, E.A. :
Growth factor-induced neurite growth in primary neuronal cultures of dogs with neuronal ceroid lipofuscinosis International Journal of Developmental Neuroscience 12:185-196, 1994. Pubmed reference: 7942092.
Katz, M.L., Christianson, J.S., Norbury, N.E., Gao, C.L., Siakotos, A.N., Koppang, N. :
Lysine Methylation of Mitochondrial ATP Synthase Subunit-c Stored in Tissues of Dogs with Hereditary Ceroid Lipofuscinosis Journal of Biological Chemistry 269:9906-9911, 1994. Pubmed reference: 8144584.
1992 Banerjee, P., Dasgupta, A., Siakotos, A.N., Dawson, G. :
Evidence for lipase abnormality: high levels of free and triacylglycerol forms of unsaturated fatty acids in neuronal ceroid-lipofuscinosis tissue. Am J Med Genet 42:549-54, 1992. Pubmed reference: 1609837. DOI: 10.1002/ajmg.1320420426.
Goebel, H.H. :
Retina in Various Animal Models of Neuronal Ceroid- Lipofuscinosis American Journal of Medical Genetics 42:605-608, 1992. Pubmed reference: 1609843. DOI: 10.1002/ajmg.1320420435.
Koppang, N. :
English Setter Model and Juvenile Ceroid-Lipofuscinosis in Man American Journal of Medical Genetics 42:599-604, 1992. Pubmed reference: 1609842. DOI: 10.1002/ajmg.1320420434.
1990 Deeg, H.J., Shulman, H.M., Albrechtsen, D., Graham, T.C., Storb, R., Koppang, N. :
Battens Disease - Failure of Allogeneic Bone Marrow Transplantation to Arrest Disease Progression in a Canine Model Clinical Genetics 37:264-270, 1990. Pubmed reference: 2350897.
1988 Koppang, N. :
The English setter with ceroid-lipofuscinosis: a suitable model for the juvenile type of ceroid-lipofuscinosis in humans. Am J Med Genet Suppl 5:117-25, 1988. Pubmed reference: 3146311.
Siakotos, A.N., Bray, R., Dratz, E., van Kuijk, F., Sevanian, A., Koppang, N. :
4-Hydroxynonenal: a specific indicator for canine neuronal-retinal ceroidosis. Am J Med Genet Suppl 5:171-81, 1988. Pubmed reference: 3146315.
1987 Koppang, N. :
Hereditary ceroid lipofuscinosis in English setter dogs. A model for human neuronal ceroid-lipofuscinosis and aging. Advances in Biosciences 64:185-195, 1987.
1984 Keller, R.K., Armstrong, D., Crum, F.C., Koppang, N. :
Dolichol and dolichyl phosphate levels in brain tissue from English setters with ceroid lipofuscinosis. J Neurochem 42:1040-7, 1984. Pubmed reference: 6321656.
1983 Nilsson, S.E., Armstrong, D., Koppang, N., Persson, P., Milde, K. :
Studies on the retina and the pigment epithelium in hereditary canine ceroid lipofuscinosis. IV. Changes in the electroretinogram and the standing potential of the eye. Invest Ophthalmol Vis Sci 24:77-84, 1983. Pubmed reference: 6681808.
1980 Armstrong, D., Neville, H., Siakotos, A., Wilson, B., Wehling, C., Koppang, N. :
Morphological and biochemical abnormalities in a model of retinal degeneration: Canine ceroid-lipofuscinosis (CCL). Neurochem Int 1C:405-26, 1980. Pubmed reference: 20487751.
Neville, H., Armstrong, D., Wilson, B., Koppang, N., Wehling, C. :
Studies on the retina and the pigment epithelium in hereditary canine ceroid lipofuscinosis. III. Morphologic abnormalities in retinal neurons and retinal pigmented epithelial cells. Invest Ophthalmol Vis Sci 19:75-86, 1980. Pubmed reference: 7350137.
1975 Berson, E.L., Watson, G. :
Electroretinograms in English Setters with neuronal ceroid lipofuscinosis Investigative Ophthalmology and Visual Science 19:87-90, 1975.
1970 Koppang, N. :
Neuronal ceroid-lipofuscinosis in English setters Journal of Small Animal Practice 10:639-644, 1970.

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