OMIA 002228-9615 : Coat colour, pigment intensity in Canis lupus familiaris
|Symbol||Description||Species||Chr||Location||OMIA gene details page||Other Links|
|KITLG||KIT ligand||Canis lupus familiaris||15||NC_051819.1 (30311189..30230533)||KITLG||Homologene, Ensembl, NCBI gene|
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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
|Breed(s)||Variant Phenotype||Gene||Allele||Type of Variant||Reference Sequence||Chr.||g. or m.||c. or n.||p.||Verbal Description||EVA ID||Year Published||PubMed ID(s)||Acknowledgements|
|Nova Scotia Duck Tolling retriever Poodle||Pigment intensity||KITLG||repeat variation||CanFam3.1||15||Weich et al. (2020): "the reference genome shows two tandem copies of the CNV spanning a region of approximately 12 kb. The CNV is located in an intergenic region about 152 kb upstream from the closest gene, KITLG." 200922: g. info moved here (g.29821450_29832950) until it can be standardised||2020||31936656|
|2020||Weich, K., Affolter, V., York, D., Rebhun, R., Grahn, R., Kallenberg, A., Bannasch, D. :|
|Pigment Intensity in Dogs is Associated with a Copy Number Variant Upstream of <i>KITLG</i>. Genes (Basel) 11:, 2020. Pubmed reference: 31936656. DOI: 10.3390/genes11010075.|
- Created by Frank Nicholas on 27 Jan 2020