OMIA:002296-9615 : XY DSD (Disorder of Sexual Development), NR5A1-related in Canis lupus familiaris |
Categories: Reproductive system phene
Possibly relevant human trait(s) and/or gene(s)s (MIM numbers): 617480 (trait) , 612965 (trait) , 613957 (trait) , 184757 (gene)
Links to MONDO diseases: No links.
Mendelian trait/disorder: yes
Considered a defect: yes
Key variant known: yes
Year key variant first reported: 2020
History: Nowacka-Woszuk et al. (2020): "This is the first mutation in the NR5A1 gene leading to XY DSD phenotype to be reported in domestic animals."
Molecular basis: Nowacka-Woszuk et al. (2020) reported "a large deletion consisting of four exons of the NR5A1 gene was identified in a Yorkshire Terrier with a rudimentary penis, hypospadias, bilateral cryptorchidism, and spermatogenesis inactive testes."
Breed: Yorkshire Terrier.
Associated gene:
| Symbol | Description | Species | Chr | Location | OMIA gene details page | Other Links |
|---|---|---|---|---|---|---|
| NR5A1 | Canis lupus familiaris | - | no genomic information (-..-) | NR5A1 | Ensembl |
Variants
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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
| OMIA Variant ID | Breed(s) | Variant Phenotype | Gene | Allele | Type of Variant | Source of Genetic Variant | Reference Sequence | Chr. | g. or m. | c. or n. | p. | Verbal Description | EVA ID | Inferred EVA rsID | Year Published | PubMed ID(s) | Acknowledgements |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1264 | Yorkshire Terrier | XY DSD (Disorder of Sexual Development), NR5A1-related | NR5A1 | deletion, gross (>20) | Naturally occurring variant | 9 | "a large deletion consisting of four exons of the NR5A1 gene" (Nowacka-Woszuk et al., 2020) | 2020 | 33128907 |
Reference
| 2020 | Nowacka-Woszuk, J., Szczerbal, I., Stachowiak, M., Dzimira, S., Nizanski, W., Biezynski, J., Nowak, T., Gogulski, M., Switonski, M. : |
| Screening for structural variants of four candidate genes in dogs with disorders of sex development revealed the first case of a large deletion in NR5A1. Anim Reprod Sci 223:106632, 2020. Pubmed reference: 33128907 . DOI: 10.1016/j.anireprosci.2020.106632. |
Edit History
- Created by Frank Nicholas on 02 Nov 2020
- Changed by Frank Nicholas on 02 Nov 2020
- Changed by Imke Tammen2 on 03 Sep 2021