OMIA:002371-9940 : Microcephaly, MFSD2A-related in Ovis aries (sheep) |
Categories: Nervous system phene
Links to possible relevant human trait(s) and/or gene(s) in OMIM: 614397 (gene) , 616486 (trait)
Links to relevant human diseases in MONDO:
Mendelian trait/disorder: yes
Mode of inheritance: Autosomal recessive
Disease-related: yes
Key variant known: yes
Year key variant first reported: 2023
Species-specific name: congenital brain hypoplasia
Mapping: Rudd Garces et al. (2024) "used a homozygosity mapping approach to identify regions of homozygosity with alleles shared by five SNP array-genotyped affected [Kerry Hill] lambs ... . Further analysis of the regions of homozygosity revealed only a single region [chr1:12 703 054–14 922 562] that was not homozygous in any unaffected sheep."
Molecular basis: Rudd Garces et al. (2024) "sequenced the genome of one affected [Kerry Hill] lamb, and comparison with 115 control genomes revealed a single private protein-changing variant. This frameshift variant, MFSD2A: c.285dupA, p.(Asp96fs*9), represents a 1-bp duplication predicted to truncate 80% of the open reading frame. ... Sanger sequencing confirmed the homozygous genotype in the seven affected lambs. Genotypes at the MFSD2A: c.285dupA variant perfectly co-segregated with the phenotype in the studied animals ... ."
Clinical features: Rudd Garces et al. (2024) "investigated an early-onset neurodegenerative disorder observed in seven lambs of purebred Kerry Hill sheep. Clinical signs included inability to stand or severe ataxia, convulsions, and early death. Diagnostic imaging and brain necropsy confirmed microcephaly."
Breed:
Kerry Hill (Sheep) (VBO_0001468).
Breeds in which the phene has been documented. (If a likely causal variant has been documented for the phene, see the variant table breeds in which the variant has been reported).
Associated gene:
Symbol | Description | Species | Chr | Location | OMIA gene details page | Other Links |
---|---|---|---|---|---|---|
MFSD2A | major facilitator superfamily domain containing 2A | Ovis aries | 1 | NC_056054.1 (14573994..14586653) | MFSD2A | Homologene, Ensembl , NCBI gene |
Variants
By default, variants are sorted chronologically by year of publication, to provide a historical perspective.
Readers can re-sort on any column by clicking on the column header. Click it again to sort in a descending
order. To create a multiple-field sort, hold down Shift while clicking on the second, third etc relevant column
headers.
WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
OMIA Variant ID | Breed(s) | Variant Phenotype | Gene | Allele | Type of Variant | Source of Genetic Variant | Reference Sequence | Chr. | g. or m. | c. or n. | p. | Verbal Description | EVA ID | Year Published | PubMed ID(s) | Acknowledgements |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1637 | Kerry Hill (Sheep) | Microcephaly, MFSD2A-related | MFSD2A | duplication | Naturally occurring variant | ARS-UI_Ramb_v2.0 | 1 | NC_056054.1:g.14577421dup | XM_004001833.5:c.285dup | XP_004001882.2:p.(D96Rfs*9) | XM_004001833.5; XP_004001882.2 | 2024 | 37921236 |
Cite this entry
Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2024). OMIA:002371-9940: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70
Reference
2024 | Rudd Garces, G., Letko, A., Häfliger, I.M., Müller, J., Herden, C., Nesseler, A., Wagner, H., Schmidt, M.J., Drögemüller, C., Lühken, G. : |
MFSD2A frameshift variant in Kerry Hill sheep with microcephaly. Anim Genet 55:152-157, 2024. Pubmed reference: 37921236. DOI: 10.1111/age.13374. |
Edit History
- Created by Imke Tammen2 on 05 Aug 2021
- Changed by Imke Tammen2 on 05 Aug 2021
- Changed by Imke Tammen2 on 05 Nov 2023
- Changed by Frank Nicholas on 31 Jul 2024