OMIA 002431-9694 : Coat colour, pseudomelanistic in Panthera tigris
|Symbol||Description||Species||Chr||Location||OMIA gene details page||Other Links|
|Taqpep||Panthera tigris||-||no genomic information (-..-)||Taqpep||Ensembl|
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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
|OMIA Variant ID||Breed(s)||Variant Phenotype||Gene||Allele||Type of Variant||Source of Genetic Variant||Reference Sequence||Chr.||g. or m.||c. or n.||p.||Verbal Description||EVA ID||Inferred EVA rsID||Year Published||PubMed ID(s)||Acknowledgements|
|1348||Pseudomelamism||Taqpep||missense||Naturally occurring variant||PanTig1.0||A1||c.1360C>T||p.H454Y||Sagar et al. (2021): "[Assembly PanTig1.0(GCF_000464555.1)]. . . . (Taqpep c.1360C > T); XP_007086933.1) of the protein (Taqpep p.H454Y)"||2021||34518374|
|2021||Sagar, V., Kaelin, C.B., Natesh, M., Reddy, P.A., Mohapatra, R.K., Chhattani, H., Thatte, P., Vaidyanathan, S., Biswas, S., Bhatt, S., Paul, S., Jhala, Y.V., Verma, M.M., Pandav, B., Mondol, S., Barsh, G.S., Swain, D., Ramakrishnan, U. :|
|High frequency of an otherwise rare phenotype in a small and isolated tiger population. Proc Natl Acad Sci U S A 118:, 2021. Pubmed reference: 34518374. DOI: 10.1073/pnas.2025273118.|
- Created by Frank Nicholas on 22 Sep 2021