OMIA 002271-9913 : Immunodeficiency, IL17RA-related in Bos taurus
|Symbol||Description||Species||Chr||Location||OMIA gene details page||Other Links|
|IL17RA||interleukin 17 receptor A||Bos taurus||5||NC_037332.1 (108807812..108823741)||IL17RA||Homologene, Ensembl, NCBI gene|
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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
|OMIA Variant ID||Breed(s)||Variant Phenotype||Gene||Allele||Type of Variant||Source of Genetic Variant||Reference Sequence||Chr.||g. or m.||c. or n.||p.||Verbal Description||EVA ID||Inferred EVA rsID||Year Published||PubMed ID(s)||Acknowledgements|
|1202||Holstein||Immunodeficiency, IL17Ra-related||IL17RA||deletion, small (<=20)||Naturally occurring variant||ARS-UCD1.2||5||g.108813251del||c.180del||p.(C61Afs*62)||XM_015460734.2: c.180delC; XP_015316220.2: p.(Cys61AlafsTer62) (Häfliger et al., 2020)||2020||32448141|
|2020||Häfliger, I.M., Sickinger, M., Holsteg, M., Raeder, L.M., Henrich, M., Marquardt, S., Drögemüller, C., Lühken, G. :|
|An IL17RA frameshift variant in a Holstein cattle family with psoriasis-like skin alterations and immunodeficiency BMC Genetics 21:55, 2020. Pubmed reference: 32448141. DOI: 10.1186/s12863-020-00860-4.|
- Created by Frank Nicholas on 26 May 2020
- Changed by Frank Nicholas on 29 May 2020
- Changed by Frank Nicholas on 02 Jun 2020