OMIA 001249-9913 : Coat colour, brown in Bos taurus
|Symbol||Description||Species||Chr||Location||OMIA gene details page||Other Links|
|TYRP1||tyrosinase-related protein 1||Bos taurus||8||NC_037335.1 (31648318..31632079)||TYRP1||Homologene, Ensembl, NCBI gene|
By default, variants are sorted chronologically by year of publication, to provide a historical perspective. Readers can re-sort on any column by clicking on the column header. Click it again to sort in a descending order. To create a multiple-field sort, hold down Shift while clicking on the second, third etc relevant column headers.
WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
|Breed(s)||Variant Phenotype||Gene||Allele||Type of Variant||Reference Sequence||Chr.||g. or m.||c. or n.||p.||Verbal Description||EVA ID||Year Published||PubMed ID(s)||Acknowledgements|
|Dexter||Dun brown||TYRP1||missense||UMD3.1||8||g.31711945C>T||c.1300C>T||p.H434Y||2003||12755816||Variant coordinates obtained from or confirmed by EBI's Some Effect Predictor (VEP) tool|
Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.
|2008||Mohanty, T.R., Seo, K.S., Park, K.M., Choi, T.J., Choe, H.S., Baik, D.H., Hwang, I.H. :|
|Molecular variation in pigmentation genes contributing to coat colour in native Korean Hanwoo cattle. Anim Genet 39:550-3, 2008. Pubmed reference: 18557975. DOI: 10.1111/j.1365-2052.2008.01746.x.|
|2003||Berryere, TG., Schmutz, SM., Schimpf, RJ., Cowan, CM., Potter, J. :|
|TYRP1 is associated with dun coat colour in Dexter cattle or how now brown cow? Anim Genet 34:169-75, 2003. Pubmed reference: 12755816.|
|1996||Nonneman, D., Shibuya, H., Johnson, G.S. :|
|A bstui pcr/rflp in the bovine tyrosinase-related PROTEIN-1 (TYRP1) gene Animal Genetics 27:218-219, 1996. Pubmed reference: 8759137.|
- Created by Frank Nicholas on 26 Nov 2005
- Changed by Frank Nicholas on 09 Dec 2011
- Changed by Frank Nicholas on 21 Sep 2012