OMIA 002229-9940 : Hypotrichosis, HR-related in Ovis aries
|Symbol||Description||Species||Chr||Location||OMIA gene details page||Other Links|
|HR||hair growth associated||Ovis aries||2||NC_056055.1 (43477833..43494705)||HR||Homologene, Ensembl, NCBI gene|
By default, variants are sorted chronologically by year of publication, to provide a historical perspective. Readers can re-sort on any column by clicking on the column header. Click it again to sort in a descending order. To create a multiple-field sort, hold down Shift while clicking on the second, third etc relevant column headers.
WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
|OMIA Variant ID||Breed(s)||Variant Phenotype||Gene||Allele||Type of Variant||Source of Genetic Variant||Reference Sequence||Chr.||g. or m.||c. or n.||p.||Verbal Description||EVA ID||Inferred EVA rsID||Year Published||PubMed ID(s)||Acknowledgements|
|319||Valle del Belice||Hypotrichosis||HR||nonsense (stop-gain)||Naturally occurring variant||Oar_rambouillet_v1.0||2||g.45703202C>T||c.1312C>T||p.(Q438*)||Oar_v3.1 position is g.43224867C>T||rs423413166||2003||12927087||Variant coordinates obtained from or confirmed by EBI's Some Effect Predictor (VEP) tool. The genomic location on Oar_rambouillet_v1.0 was determined by Katie Eager, EMAI, NSW Department of Primary Industries.|
Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.
|2008||Finocchiaro, R., Castiglioni, B., Budelli, E., van Kaam, J.B., Portolano, B., Caroli, A., Pagnacco, G. :|
|Chromosomal assignment of the ovine hairless (hr) gene by fluorescence insitu hybridization. Hereditas 145:258-61, 2008. Pubmed reference: 19076694. DOI: 10.1111/j.1601-5223.2008.02062.x.|
|2003||Finocchiaro, R., Portolano, B., Damiani, G., Caroli, A., Budelli, E., Bolla, P., Pagnacco, G. :|
|The hairless (hr) gene is involved in the congenital hypotrichosis of Valle del Belice sheep Genetics Selection Evolution 35:S147-56, 2003. Pubmed reference: 12927087. DOI: 10.1051/gse:2003023.|
- Created by Frank Nicholas on 27 Jan 2020
- Changed by Frank Nicholas on 27 Jan 2020