OMIA 001089-9598 : Blood group system ABO in Pan troglodytes
|Symbol||Description||Species||Chr||Location||OMIA gene details page||Other Links|
|ABO||ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)||Pan troglodytes||9||NC_036888.1 (105542142..105516107)||ABO||Homologene, Ensembl, NCBI gene|
By default, variants are sorted chronologically by year of publication, to provide a historical perspective. Readers can re-sort on any column by clicking on the column header. Click it again to sort in a descending order. To create a multiple-field sort, hold down Shift while clicking on the second, third etc relevant column headers.
WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
|OMIA Variant ID||Breed(s)||Variant Phenotype||Gene||Allele||Type of Variant||Source of Genetic Variant||Reference Sequence||Chr.||g. or m.||c. or n.||p.||Verbal Description||EVA ID||Inferred EVA rsID||Year Published||PubMed ID(s)||Acknowledgements|
|532||O (lack of antigen)||ABO||O^del||deletion, small (<=20)||Naturally occurring variant||c.514_522delGTGCTGGAG||p.(V172-E174del)||1999||10380696|
|24||O (lack of antigen)||ABO||O^x||missense||Naturally occurring variant||c.791A>C||p.(Y264C)||1999||10380696|
Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.
|2010||Gamble, K.C., Moyse, J.A., Lovstad, J.N., Ober, C.B., Thompson, E.E. :|
|Blood groups in the Species Survival Plan®, European endangered species program, and managed in situ populations of bonobo (Pan paniscus), common chimpanzee (Pan troglodytes), gorilla (Gorilla ssp.), and orangutan (Pongo pygmaeus ssp.). Zoo Biol 30:427-44, 2010. Pubmed reference: 20853409. DOI: 10.1002/zoo.20348.|
|2000||Kitano, T., Noda, R., Sumiyama, K., Ferrell, R.E., Saitou, N. :|
|Gene diversity of chimpanzee ABO blood group genes elucidated from intron 6 sequences. J Hered 91:211-4, 2000. Pubmed reference: 10833046. DOI: 10.1093/jhered/91.3.211.|
|Sumiyama, K., Kitano, T., Noda, R., Ferrell, R.E., Saitou, N. :|
|Gene diversity of chimpanzee ABO blood group genes elucidated from exon 7 sequences. Gene 259:75-9, 2000. Pubmed reference: 11163964.|
|1999||Kermarrec, N., Roubinet, F., Apoil, P.A., Blancher, A. :|
|Comparison of allele O sequences of the human and non-human primate ABO system. Immunogenetics 49:517-26, 1999. Pubmed reference: 10380696.|
|1997||O'hUigin, C., Sato, A., Klein, J. :|
|Evidence for convergent evolution of A and B blood group antigens in primates. Hum Genet 101:141-8, 1997. Pubmed reference: 9402958. DOI: 10.1007/s004390050603.|
|1974||Wiener, A.S., Socha, W.W., Moor-Jankowski, J. :|
|Homologous of the human A-B-O blood groups in apes and monkeys. Haematologia (Budap) 8:195-216, 1974. Pubmed reference: 4142617.|
- Created by Frank Nicholas on 19 Oct 2011
- Changed by Frank Nicholas on 19 Oct 2011
- Changed by Frank Nicholas on 12 Dec 2011
- Changed by Frank Nicholas on 27 Nov 2013
- Changed by Frank Nicholas on 31 Mar 2020