OMIA:000202-9615 : Coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Canis lupus familiaris (dog) |
In other species: Japanese medaka , axolotl , marine toad , dark-spotted frog , Japanese wrinkled frog , Tufted capuchin , Rhesus monkey , hamadryas baboon , red fox , domestic ferret , domestic cat , lion , humpback whale , ass (donkey) , pig , red deer , American bison , taurine cattle , rabbit , golden hamster , Mongolian gerbil , domestic guinea pig , Japanese ratsnake , thirteen-lined ground squirrel , ball python , water buffalo , four-striped grass mouse , ocelot gecko , American mink , Rice frog , red-necked wallaby , Japanese raccoon dog
Categories: Pigmentation phene , Vision / eye phene
Links to possible relevant human trait(s) and/or gene(s) in OMIM: 203100 (trait) , 606952 (trait) , 606933 (gene)
Single-gene trait/disorder: yes
Disease-related: yes
Key variant known: yes
Year key variant first reported: 2020
Cross-species summary: Congenital lack of pigment in most parts of the body. Due to a non-functional form of the enzyme tyrosinase. Also known as oculocutaneous albinism (OCA), acromelanism and as the Himalayan coat-colour pattern.
Species-specific name: Acromelanism; Himalayan coat color/colour
Inheritance: Bychkova et al. (2020): "The proband’s mother, which is black-and-tan, is a heterozygous carrier of the c.230A allele [omia.variant:1247]".
Molecular basis:
Bychkova et al. (2020): "Sequencing of the coding part of the TYR gene from the proband ["a dachshund with a unique coat color resembling the Himalayan type"] revealed a homozygous variant (c.230G > A) in exon 1, leading to an amino acid substitution (p.R77Q) in a conserved region of the protein [omia.variant:1247]."
Van Buren et al. (2025) "investigated a family of rescue dogs that display a characteristic Himalayan coat color ... [and] identified a novel TYR variant (c.229C>T, p.Arg77Trp) in exon 1 in the homozygous state in the five Himalayan dogs [omia.variant:1758]."
Prevalence: Bychkova et al. (2020): "none of the 210 dogs of different breeds, unrelated to the proband, carried the c.230A allele"
Breeds:
Dachshund (Dog) (VBO_0200406),
Mixed Breed (Dog) (VBO_0200902).
Breeds in which the phene or likely causal variants have been documented. If a likely causal variant has been documented, see variant-specific breed information in the variant table. (Breed information may be incomplete).
Associated gene:
| Symbol | Description | Species | Chr | Location | OMIA gene details page | Other Links |
|---|---|---|---|---|---|---|
| TYR | tyrosinase | Canis lupus familiaris | 21 | NC_051825.1 (11074816..10980195) | TYR | Ensembl, NCBI gene |
Variants
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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
| OMIA Variant ID | Breed(s) | Variant Phenotype | Gene | Allele | Variant Type | Variant Effect | Source of Genetic Variant | Pathogenicity Classification* | Reference Sequence | Chr. | g. or m. | c. or n. | p. | Verbal Description | EVA ID | Year Published | PubMed ID(s) | Acknowledgements |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1758 | Mixed Breed (Dog) | Himalayan coat colour | TYR | substitution | missense | Naturally occurring variant | Not currently evaluated | CanFam3.1 | 21 | NC_006603.3:10893930G>A | NM_001002941.1:c.229C>T | NP_001002941.1:p.(R77W) | 2025 | 39709984 | ||||
| 1247 | Dachshund (Dog) | Himalayan coat colour | TYR | substitution | missense | Naturally occurring variant | Not currently evaluated | CanFam3.1 | 21 | NC_006603.3:g.10893929C>T | NM_001002941.1:c.230G>A | NP_001002941.1:p.(R77Q) | NM_001002941.1; NP_001002941.1 | 2020 | 33039541 | Genomic coordinates in CanFam3.1 provided by Robert Kuhn |
* Variant pathogenicity for single gene diseases as evaluated by an expert panel of the International Society of Animal Genetics (ISAG) Animal Genetic Testing Standardization Standing Committee
Contact us
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Cite this entry
Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2024). OMIA:000202-9615: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70
References
Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.
| 2025 | Van Buren, S.L., Panjwani, A., Finno, C.J. : |
| A TYR-iffic discovery: Identification of a second TYR variant associated with acromelanism in dogs. Anim Genet 56:e13496, 2025. Pubmed reference: 39709984. DOI: 10.1111/age.13496. | |
| 2022 | [No authors listed] : |
| Canine coat pigmentation genetics: a review. Anim Genet 53:474-475, 2022. Pubmed reference: 35510419. DOI: 10.1111/age.13185. | |
| Brancalion, L., Haase, B., Wade, C.M. : | |
| Canine coat pigmentation genetics: a review. Anim Genet 53:33-34, 2022. Pubmed reference: 34751460. DOI: 10.1111/age.13154. | |
| 2020 | Bychkova, E., Viktorovskaya, O., Filippova, E., Eliseeva, Z., Barabanova, L., Sotskaya, M., Markov, A. : |
| Identification of a candidate genetic variant for the Himalayan color pattern in dogs. Gene 769:145212, 2020. Pubmed reference: 33039541. DOI: 10.1016/j.gene.2020.145212. | |
| 2002 | Schmidtz, B.H., Schmutz, S.M. : |
| Linkage mapping of TYR to dog chromosome 21 Anim Genet 33:476-7, 2002. Pubmed reference: 12464032. DOI: 10.1046/j.1365-2052.2002.00938_8.x. |
Edit History
- Created by Frank Nicholas on 06 Sep 2005
- Changed by Frank Nicholas on 21 Oct 2020
- Changed by Imke Tammen2 on 27 Dec 2024