OMIA 001199-9870 : Coat colour, extension in Rangifer tarandus |
Symbol | Description | Species | Chr | Location | OMIA gene details page | Other Links |
---|---|---|---|---|---|---|
MC1R | Rangifer tarandus | - | no genomic information (-..-) | MC1R | Ensembl |
Variants
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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
OMIA Variant ID | Breed(s) | Variant Phenotype | Gene | Allele | Type of Variant | Source of Genetic Variant | Reference Sequence | Chr. | g. or m. | c. or n. | p. | Verbal Description | EVA ID | Inferred EVA rsID | Year Published | PubMed ID(s) | Acknowledgements |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
180 | Coat colour, extension | MC1R | missense | Naturally occurring variant | c.218T>C | p.(M73T) | 2014 | 25039753 | |||||||||
181 | Coat colour, extension | MC1R | missense | Naturally occurring variant | c.839T>G | p.(F280C) | 2014 | 25039753 |
Reference
2014 | Våge, D.I., Nieminen, M., Anderson, D.G., Røed, K.H. : | |
Two missense mutations in melanocortin 1 receptor (MC1R) are strongly associated with dark ventral coat color in reindeer (Rangifer tarandus). Anim Genet 45:750-3, 2014. Pubmed reference: 25039753. DOI: 10.1111/age.12187. |
Edit History
- Created by Frank Nicholas on 30 Apr 2015