OMIA 000201-10141 : Coat colour, agouti in Cavia porcellus
|Symbol||Description||Species||Chr||Location||OMIA gene details page||Other Links|
|Asip||agouti signaling protein||Cavia porcellus||-||no genomic information (-..-)||Asip||Homologene, Ensembl, NCBI gene|
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WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
Since October 2021, OMIA includes a semiautomated lift-over pipeline to facilitate updates of genomic positions to a recent reference genome position. These changes to genomic positions are not always reflected in the ‘acknowledgements’ or ‘verbal description’ fields in this table.
|OMIA Variant ID||Breed(s)||Variant Phenotype||Gene||Allele||Type of Variant||Source of Genetic Variant||Reference Sequence||Chr.||g. or m.||c. or n.||p.||Verbal Description||EVA ID||Inferred EVA rsID||Year Published||PubMed ID(s)||Acknowledgements|
|1119||Recessive black||Asip||deletion, small (<=20)||Naturally occurring variant||c.181_184delTTCA||MH026115: c.181_184delTTCA; the deletion leads to a truncated protein of 77 amino acids due to the premature stop codon.||2019||30746725|
Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.
|2019||Lai, W., Hu, M., Zhu, W., Yu, F., Bai, C., Zhang, J., Yan, S. :|
|A 4-bp deletion in the ASIP gene is associated with the recessive black coat colour in domestic guinea pigs (Cavia porcellus). Anim Genet 50:190-191, 2019. Pubmed reference: 30746725. DOI: 10.1111/age.12766.|
|Sakuma, Y., Matsunami, M., Takada, T., Suzuki, H. :|
|Multiple conserved elements structuring inverted repeats in the mammalian coat color-related gene Asip. Zoolog Sci 36:23-30, 2019. Pubmed reference: 31116535. DOI: 10.2108/zs180081.|
- Created by Frank Nicholas on 21 Sep 2019
- Changed by Frank Nicholas on 21 Sep 2019