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OMIA:002637-9823 : Adaptation, environment, generic in Sus scrofa (pig)

In other species: Atlantic herring , Mexican tetra , rainbow trout , Atlantic salmon , brown trout , Atlantic cod , Southern cod-icefishes , bullfrog , Asian annulated sea snake , swan goose , chicken , Great Tit , hamadryas baboon , dog , true foxes , Corsac fox , giant panda , saddleback dolphin , ass (donkey) , horse , Bactrian camel , Arabian camel , reindeer , taurine cattle , indicine cattle (zebu) , goat , sheep , Mongolian gerbil , snow leopard , polar bear , domestic yak , jerboas , Atlantic horse mackerel , muskox , woolly mammoth , Common warthog , snowshoe hare , oriental stork , turbot , Clouded leopard , black snub-nosed monkey , Mountain hare , white-tailed jackrabbit , Steller's sea cow , Wuchang bream , water buffalo , kiang , Pacific saury , black-lipped pika , stone loach , pike icefish , European sprat , Mongolian five-toed jerboa , Northern mole vole , Asiatic mouflon , snub-nosed monkeys , leafy seadragon

Categories: Normal phene

Mendelian trait/disorder: unknown

Disease-related: no

Cite this entry

Nicholas, F. W., Tammen, I., & Sydney Informatics Hub. (2023). OMIA:002637-9823: Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70

References

Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.

2024 Fang, S., Zhang, H., Long, H., Zhang, D., Chen, H., Yang, X., Pan, H., Pan, X., Liu, D., E, G. :
Phylogenetic relations and high-altitude adaptation in wild boar (Sus scrofa), identified using genome-wide data. Animals (Basel) 14:2984, 2024. Pubmed reference: 39457914. DOI: 10.3390/ani14202984.
Hlongwane, N.L., Dzomba, E.F., Hadebe, K., van der Nest, M.A., Pierneef, R., Muchadeyi, F.C. :
Identification of signatures of positive selection that have shaped the genomic landscape of South African pig populations. Animals (Basel) 14:236, 2024. Pubmed reference: 38254405. DOI: 10.3390/ani14020236.
Liu, P., Liang, Y., Li, L., Lv, X., He, Z., Gu, Y. :
Identification of selection signatures and candidate genes related to environmental adaptation and economic traits in Tibetan pigs. Animals (Basel) 14:654, 2024. Pubmed reference: 38396622. DOI: 10.3390/ani14040654.
Ni, B., Tang, L., Zhu, L., Li, X., Zhang, K., Nie, H., Ye, Z., Wang, Y., Zhu, L., Kong, X., Gou, X. :
Screening of functional genes for hypoxia adaptation in Tibetan pigs by combined genome resequencing and transcriptome analysis. Front Vet Sci 11:1486258, 2024. Pubmed reference: 39497743. DOI: 10.3389/fvets.2024.1486258.
Wang, Y., Gou, Y., Yuan, R., Zou, Q., Zhang, X., Zheng, T., Fei, K., Shi, R., Zhang, M., Li, Y., Gong, Z., Luo, C., Xiong, Y., Shan, D., Wei, C., Shen, L., Tang, G., Li, M., Zhu, L., Li, X., Jiang, Y. :
A chromosome-level genome of Chenghua pig provides new insights into the domestication and local adaptation of pigs. Int J Biol Macromol 270:131796, 2024. Pubmed reference: 38677688. DOI: 10.1016/j.ijbiomac.2024.131796.
Wang, Z., Song, B., Yao, J., Li, X., Zhang, Y., Tang, Z., Yi, G. :
Whole-genome analysis reveals distinct adaptation signatures to diverse environments in Chinese domestic pigs. J Anim Sci Biotechnol 15:97, 2024. Pubmed reference: 38982489. DOI: 10.1186/s40104-024-01053-0.
Yang, Y., Yuan, H., Yao, B., Zhao, S., Wang, X., Xu, L., Zhang, L. :
Genetic adaptations of the Tibetan pig to high-altitude hypoxia on the Qinghai-Tibet plateau. Int J Mol Sci 25:11303, 2024. Pubmed reference: 39457085. DOI: 10.3390/ijms252011303.
Zhang, H., Ruan, P., Cong, H., Xu, L., Yang, B., Ren, T., Zhang, D., Chen, H., Hu, P., Wang, Z., Pan, H., Yang, X., Han, Y., Zeng, Y., Zhao, Y., Liu, D., Ceccobelli, S., E, G. :
Genomic insights into pig domestication and adaptation: An integrated approach using genome-wide selection analysis and multiple public datasets. Animals (Basel) 14:3159, 2024. Pubmed reference: 39518882. DOI: 10.3390/ani14213159.
Zhang, L., Zhu, Y., Ren, Y., Xu, L., Liu, X., Qi, X., Jiao, T., Sun, G., Han, H., Zhang, J., Sun, F., Yang, Y., Zhao, S. :
Genetic characterization of Tibetan pigs adapted to high altitude under natural selection based on a large whole-genome dataset. Sci Rep 14:17062, 2024. Pubmed reference: 39048584. DOI: 10.1038/s41598-024-65559-3.
2023 Jiang, Y.F., Wang, S., Wang, C.L., Xu, R.H., Wang, W.W., Jiang, Y., Wang, M.S., Jiang, L., Dai, L.H., Wang, J.R., Chu, X.H., Zeng, Y.Q., Fang, L.Z., Wu, D.D., Zhang, Q., Ding, X.D. :
Pangenome obtained by long-read sequencing of 11 genomes reveal hidden functional structural variants in pigs. iScience 26:106119, 2023. Pubmed reference: 36852268. DOI: 10.1016/j.isci.2023.106119.
Li, Z., Liu, X., Wang, C., Li, Z., Jiang, B., Zhang, R., Tong, L., Qu, Y., He, S., Chen, H., Mao, Y., Li, Q., Pook, T., Wu, Y., Zan, Y., Zhang, H., Li, L., Wen, K., Chen, Y. :
The pig pangenome provides insights into the roles of coding structural variations in genetic diversity and adaptation. Genome Res 33:1833-1847, 2023. Pubmed reference: 37914227. DOI: 10.1101/gr.277638.122.
Suárez-Mesa, R., Ros-Freixedes, R., Laghouaouta, H., Pena, R.N., Hernández-Ortiz, B., Rondón-Barragán, I., Estany, J. :
Identification of breed-specific genomic variants in Colombian Creole pig breeds by whole-genome sequencing. Trop Anim Health Prod 55:154, 2023. Pubmed reference: 37041265. DOI: 10.1007/s11250-023-03557-9.
Wang, F., Zha, Z., He, Y., Li, J., Zhong, Z., Xiao, Q., Tan, Z. :
Genome-wide re-sequencing data reveals the population structure and selection signatures of Tunchang pigs in China. Animals (Basel) 13:1835, 2023. Pubmed reference: 37889708. DOI: 10.3390/ani13111835.

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  • Created by Imke Tammen2 on 01 Mar 2023